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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT3G24120-AT1G31780Network Display
Gold Standard Positiverelated
Method: text mining 21798944(yeast-2-hybrid)
LocusSymbolNumber of interactionsAnnotation
AT3G24120AT3G24120GSP:10 PPI:11See Detailmyb family transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT3G24120.1:myb family transcription factor; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: UNE16 (unfertilized embryo sac 16); transcription factor (TAIR:AT4G13640.1); Has 946 Blast hits to 937 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 895; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

AT3G24120.2:myb family transcription factor; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: UNE16 (unfertilized embryo sac 16); transcription factor (TAIR:AT4G13640.2); Has 910 Blast hits to 901 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 897; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G24120;
IPI: IPI00655459; IPI00531757;
UniParc: UPI00000A02B6; UPI00000A669F;
REFSEQ: NP_566744.1; NP_974356.1;
KEGG: AT3G24120;
LocusSymbolNumber of interactionsAnnotation
AT1G31780AT1G31780GSP:8 PPI:8See Detailhypothetical protein.
Subcellar localization
golgi: Pubmed12444417; vacuole: Pubmed12444417;
Representative Gene Model Description
AT1G31780.1:FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 281 Blast hits to 279 proteins in 131 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 106; Plants - 21; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G31780;
IPI: IPI00520532;
UniParc: UPI00002537D4;
REFSEQ: NP_174458.2;
KEGG: AT1G31780;

query fail :Table 'shiyan_test.at_domain' doesn't exist