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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT2G21620-HYL1Network Display
Gold Standard Positiverelated
Method: text mining 25294831(yeast-2-hybrid)
LocusSymbolNumber of interactionsAnnotation
AT2G21620RD2GSP:11 PPI:11See DetailRD2.
Representative Gene Model Description
AT2G21620.1:RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: universal stress protein (USP) family protein (TAIR:AT3G11930.1); Has 594 Blast hits to 594 proteins in 125 species: Archae - 44; Bacteria - 146; Metazoa - 41; Fungi - 38; Plants - 312; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

AT2G21620.2:RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: universal stress protein (USP) family protein (TAIR:AT3G11930.1); Has 630 Blast hits to 630 proteins in 131 species: Archae - 48; Bacteria - 162; Metazoa - 43; Fungi - 40; Plants - 321; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G21620;
IPI: IPI00537332; IPI00530272;
UniParc: UPI000009F795; UPI000009CF4D;
REFSEQ: NP_850015.1; NP_850016.1;
KEGG: AT2G21620;
LocusSymbolNumber of interactionsAnnotation
AT1G09700HYL1GSP:35 PPI:35See DetailHYL1 (HYPONASTIC LEAVES 1); double-stranded RNA binding / miRNA binding / protein binding.
Subcellar localization
nucleus: Pubmed11148283;
Representative Gene Model Description
AT1G09700.1:HYPONASTIC LEAVES 1 (HYL1); FUNCTIONS IN: double-stranded RNA binding, protein binding, miRNA binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear dicing body, nucleus, Cajal body; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: DRB3 (dsRNA-binding protein 3); RNA binding / double-stranded RNA binding (TAIR:AT3G26932.2); Has 537 Blast hits to 480 proteins in 155 species: Archae - 14; Bacteria - 232; Metazoa - 95; Fungi - 6; Plants - 118; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).

Related Mutant  
M5080 Related gene:AT1G09700;
Method:NULL
Phenotype:Pro35S:HYL1D1 (D1) plants look like hyl1 mutants, with incurved leaves.(PMID: 17337628)They looked like hyl1 mutants and had a series of phenotypic abnormalities, such as small stature and delayed flowering. Thus, it seems that Pro35S:HYL1D1 does not rescue the hyl1 mutant phenotype.(PMID: 17337628)
Related PO:leaf  PO:0009025    flower  PO:0009046          
Related Datasource Link:

M5159 Related gene:AT1G09700;
Method:NULL
Phenotype:HYL1 is a null allele harboring a transfer DNA insertion in the first dsRBD and exhibits multiple phenotypes, including hyponastic rosette leaves, small stature, abnormal sensitivities to hormones, and low levels of miRNAs.Within T1 transgenic plant population, similar to transgenic plants expressing HYL1-YFP in hyl1 background in which 91.7% (22/24) plants showed recovery of the hyl1 phenotype, in DCL1-D1D2-YFP/hyl1 plants, 89.5% (17/19) of them complemented the hyl1 phenotype, as shown in visual phenotypes at different growth stages(Fig.1B).(PMID: 23886622)
Related PO:leaf  PO:0025034    
Related Datasource Link:
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Database cross-references
TAIR Gene: AT1G09700;
IPI: IPI00525041;
UniParc: UPI00000A6CE8;
REFSEQ: NP_563850.1;
KEGG: AT1G09700;

query fail :Table 'shiyan_test.at_domain' doesn't exist