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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT1G75410-KNAT6Network Display
Gold Standard Positiverelated
Method: text mining 15781858(yeast-2-hybrid assay)
LocusSymbolNumber of interactionsAnnotation
AT1G75410BLH3GSP:48 PPI:49See DetailBLH3 (BEL1-LIKE HOMEODOMAIN 3); DNA binding / transcription factor.
Subcellar localization
nucleus: Pubmed16513846;
Representative Gene Model Description
AT1G75410.1:BEL1-LIKE HOMEODOMAIN 3 (BLH3); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL10 (BEL1-LIKE HOMEODOMAIN 10); DNA binding / transcription factor (TAIR:AT1G19700.2); Has 4273 Blast hits to 4257 proteins in 271 species: Archae - 0; Bacteria - 20; Metazoa - 1735; Fungi - 191; Plants - 2032; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink).

AT1G75410.2:BEL1-LIKE HOMEODOMAIN 3 (BLH3); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL10 (BEL1-LIKE HOMEODOMAIN 10); DNA binding / transcription factor (TAIR:AT1G19700.2); Has 4273 Blast hits to 4257 proteins in 271 species: Archae - 0; Bacteria - 20; Metazoa - 1735; Fungi - 191; Plants - 2032; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G75410;
IPI: IPI00533083;
UniParc: UPI00000A25AD;
REFSEQ: NP_001077827.1; NP_177674.1;
KEGG: AT1G75410;
LocusSymbolNumber of interactionsAnnotation
AT1G23380KNAT6GSP:29 PPI:39See DetailKNAT6; DNA binding / transcription activator/ transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT1G23380.1:KNAT6; FUNCTIONS IN: transcription factor activity, transcription activator activity, DNA binding; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2); transcription factor (TAIR:AT1G70510.1); Has 5090 Blast hits to 5090 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 1461; Fungi - 168; Plants - 3377; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

AT1G23380.2:KNAT6; FUNCTIONS IN: transcription factor activity, transcription activator activity, DNA binding; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2); transcription factor (TAIR:AT1G70510.1); Has 5089 Blast hits to 5089 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 1461; Fungi - 168; Plants - 3376; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G23380;
IPI: IPI00531970; IPI00527042;
UniParc: UPI000000BE44; UPI0001505794;
REFSEQ: NP_173752.3; NP_850951.2;
KEGG: AT1G23380;

query fail :Table 'shiyan_test.at_domain' doesn't exist