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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT1G05000-PRNNetwork Display
Gold Standard Positiverelated
Method: text mining 21036873(yeast-2-hybrid assay:FDS1176001)
LocusSymbolNumber of interactionsAnnotation
AT1G05000AT1G05000GSP:30 PPI:72See Detailtyrosine specific protein phosphatase family protein.
Representative Gene Model Description
AT1G05000.1:tyrosine specific protein phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: tyrosine specific protein phosphatase family protein (TAIR:AT2G32960.1); Has 450 Blast hits to 437 proteins in 100 species: Archae - 0; Bacteria - 32; Metazoa - 3; Fungi - 253; Plants - 83; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).

AT1G05000.2:tyrosine specific protein phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: tyrosine specific protein phosphatase family protein (TAIR:AT2G32960.1).

Related Mutant  
M3718 Related gene:AT1G05000;
Method:insertion site: 1426530,insertion site: 1426537
Phenotype:embryo lethal (unconfirmed)
Related PO:embryo  PO:0009009          
Related Datasource Link:CSHL database
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Database cross-references
TAIR Gene: AT1G05000;
IPI: IPI00938849; IPI00541248;
UniParc: UPI0001A7B27D; UPI000000C582;
REFSEQ: NP_171993.1; NP_001154304.1;
KEGG: AT1G05000;
LocusSymbolNumber of interactionsAnnotation
AT3G59220PRNGSP:42 PPI:45See DetailPRN (PIRIN); calmodulin binding.
Subcellar localization
nucleus: Pubmed16381842;
Representative Gene Model Description
AT3G59220.1:PIRIN (PRN); FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to low fluence blue light stimulus by blue low-fluence system, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pirin (InterPro:IPR012093), Pirin, C-terminal (InterPro:IPR008778), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin, putative (TAIR:AT2G43120.1); Has 5386 Blast hits to 5384 proteins in 855 species: Archae - 43; Bacteria - 2852; Metazoa - 62; Fungi - 146; Plants - 68; Viruses - 0; Other Eukaryotes - 2215 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G59220;
IPI: IPI00545241;
UniParc: UPI00000010D3;
REFSEQ: NP_191481.1;
KEGG: AT3G59220;

query fail :Table 'shiyan_test.at_domain' doesn't exist